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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789821.1_cds_XP_016498535.1_1181
CDS Infomation

[gene=LOC107817249] [db_xref=GeneID:107817249] [protein=exopolygalacturonase-like] [protein_id=XP_016498535.1] [location=join(13895..14083,14911..15225,15701..15990,16093..16309,16412..16645)] [gbkey=CDS]
Sequence

ATGGCCATGACTACGATTGGTTTAGTCCTCATTCTTGTGTTGTATTCAGCTTTGATTATT
ACGTGCAATGCAGCTGTAGTTGGTGGCCTTCTTCCTCAACCTGCAGGTGCCAATAATATT
GCTGATCAAACCATTTTTAATGTGTTGAATTTTGGTGCCAAACCTAACTCAGAACTCATA
AGCACACAGGCATTTATGAGGGCATGGCGAGCAGCATGTGATTTCAATGGAAGAGCAAGA
GTTTTTGTACCACCTGGAGTATATACACTAGCAGAGACCATATTTTCAGGACCATGCAAA
GGAACACATCCTATAATGGTTCAAATTGCAGGAACGTTAAAAGCAGTGGCTGATGTTTCT
GAATATTCAAACTTTGCTTGGATTTCTTTTGATTCAATTAATGGCATTATTATTACTGGT
GGAGGCACTTTAGATGCTCAAGGTCAAGCTCTTTGGCAGTTTAATTACTGTAAAACCAAT
CTTAATTGTGTCCACCTCCCTGCTACCTTATTCTTCAATGGTGTAGAGAACGGAAAAGTG
ATGAGGCTGAATTTGATAAATAGCATGGGATTTCATATACATATTACTAATAGCTATTTA
GTAAGGTTCCATGCCCTTAGCATTGATGCTCCAGAAAACAGCCCAAACACTGATGGCATA
CACATAAGCAAATCTAACACTATAAAACTCTCCAGAAGTGTAATTAGAACAGGGGATGAT
TGTGTCTCATTTGGACAAGGAGCAAATAATGTGACCGTTAACAAAGTCACTTGTGGCCCT
GGCCATGGCATTAGTGTAGGTAGTATTGGTAAGTTGCCTGGCGAATTAGAAATTAAAGGA
CTCATAGTGAAAAATTGCACGTTGAGGGGCACAACAAATGGTATCAGAATCAAAACTTTT
GCAGGAGCGAATCCTAACAGAGCAATAGGGATGATGTTCAGCGATATTGTCATGGAAAAC
GTTAAAAATCCAATCATCATAGACCAGAGTTATGGTGATAAATCAACCGAGCCATCACAA
GTAAGAATAAGTGATGTAATTTACCAGAATATAAGGGGAACAACAACAAGTGAAGTAGCA
GTGCAATTGATGTGCAGTGCACGACTCCCTTGCCTAAATGTTCGACTTACCAACATAAAT
TTGAAGCATATAGCAAATACGCCAATTACTTCTCAATGTCAAAATGCAAATGTTGGCTAT
ACTGGCATCCAATTACCACCTCCTTGCCATGGACCCTCTTCATAG

Peptide Sequence

PEP ID

XP_016498535.1
PEP Infomation

PREDICTED: exopolygalacturonase-like [Nicotiana tabacum]
Sequence

MAMTTIGLVLILVLYSALIITCNAAVVGGLLPQPAGANNIADQTIFNVLNFGAKPNSELI
STQAFMRAWRAACDFNGRARVFVPPGVYTLAETIFSGPCKGTHPIMVQIAGTLKAVADVS
EYSNFAWISFDSINGIIITGGGTLDAQGQALWQFNYCKTNLNCVHLPATLFFNGVENGKV
MRLNLINSMGFHIHITNSYLVRFHALSIDAPENSPNTDGIHISKSNTIKLSRSVIRTGDD
CVSFGQGANNVTVNKVTCGPGHGISVGSIGKLPGELEIKGLIVKNCTLRGTTNGIRIKTF
AGANPNRAIGMMFSDIVMENVKNPIIIDQSYGDKSTEPSQVRISDVIYQNIRGTTTSEVA
VQLMCSARLPCLNVRLTNINLKHIANTPITSQCQNANVGYTGIQLPPPCHGPSS

Transcript Sequence

Gene sequence data has not been registered.